👓 Can we #IndieWeb Google Scholar? #HigherEd | Greg McVerry

Read Can we #IndieWeb Google Scholar? #HigherEd by Greg McVerry (jgregorymcverry.com)
So during my (ongoing) microformats crash course I have styled many citations. Writing an APA citation in html with proper markup take time. A lot of time when you write a lot of citations. While I would consider a canonical link back to to a piece listed or displayed on an author’s website as leg...
Nothing warms my heart more than talk of furthering the idea of making academic samizdat easier and more prevalent. Some of the sketched ideas here are a necessary start.

👓 Blogging, small-b, Big B | W. Ian O’Byrne

Read Blogging, small-b, Big B by W. Ian O'Byrne (W. Ian O'Byrne)
I’ve written quite a bit about blogging, and my creation of open education resources over the past on this website. A lot has changed in my blogging habits, and general digital identity construction since those posts. Most of the response that I get from colleagues, students, and tenure committees is “why in the world would you share that stuff openly online?” As such, I’ve been meaning to write up a post documenting my thinking about why I do…what I do.
One of these days I’ll get around to writing up my larger thesis about using a personal website for an all-in academic samizdat experience to rid academia of the siloed mindset its been stuck in for ages… This post comes relatively close to laying the underlying groundwork for some motivation.

As an academic, I need to regularly have empirical research publications in top-tier, peer-reviewed journals. Nothing else matters. Many senior colleagues bemoan the fact that I need to play double duty…yet the system still exists.

And why can’t your own blog count as a top-tier, peer-reviewed journal?

and serve as pre-prints to work that may live later on, or always exist in their current format

Thinking of a personal site as a pre-print server is an interesting concept and somewhat similar to the idea of a commonplace book.

🔖 The Theory of Quantum Information by John Watrous

Bookmarked The Theory of Quantum Information by Tom Watrous (cs.uwaterloo.ca)

To be published by Cambridge University Press in April 2018.

Upon publication this book will be available for purchase through Cambridge University Press and other standard distribution channels. Please see the publisher's web page to pre-order the book or to obtain further details on its publication date.

A draft, pre-publication copy of the book can be found below. This draft copy is made available for personal use only and must not be sold or redistributed.

This largely self-contained book on the theory of quantum information focuses on precise mathematical formulations and proofs of fundamental facts that form the foundation of the subject. It is intended for graduate students and researchers in mathematics, computer science, and theoretical physics seeking to develop a thorough understanding of key results, proof techniques, and methodologies that are relevant to a wide range of research topics within the theory of quantum information and computation. The book is accessible to readers with an understanding of basic mathematics, including linear algebra, mathematical analysis, and probability theory. An introductory chapter summarizes these necessary mathematical prerequisites, and starting from this foundation, the book includes clear and complete proofs of all results it presents. Each subsequent chapter includes challenging exercises intended to help readers to develop their own skills for discovering proofs concerning the theory of quantum information.

h/t to @michael_nielsen via Nuzzel

👓 Sci-Hub Loses Domain Names, But Remains Resilient | TorrentFreak

Read Sci-Hub Loses Domain Names, But Remains Resilient by Ernesto (TorrentFreak)
Sci-Hub, often referred to as the "Pirate Bay of Science," lost three of its domain names this week. The suspensions are likely the result of the lost court case against the American Chemical Society. Despite the setback, Sci-Hub remains resilient, pointing out that there are other ways to access the site including its own custom DNS servers.

👓 Link: The futility of science communication conferences by John Hawks

Read Link: The futility of science communication conferences by John Hawks (johnhawks.net)
Rich Borschelt is the communication director for science at the Department of Energy, and recently attended a science communication workshop. He describes at some length his frustration at the failed model of science communication, in which every meeting hashes over the same futile set of assumptions: “Communication, Literacy, Policy: Thoughts on SciComm in a Democracy. After several other issues, he turns to the conferences’ attitude about scientists...
John’s note reminds me that I’ve been watching a growing and nasty trend against science, much less science communication, in the past several years. We’re going to be needing a lot more help than we’re getting lately to turn the tide for the better. Perhaps more scientists having their own websites and expanding on the practice of samizdat would help things out a bit?

I recently came across Science Sites, a non-profit web company, courtesy of mathematician Steven Strogatz who has a site built by them. In some sense, I see some of what they’re doing to be enabling scientists to become part of the IndieWeb. It would be great to see them support standards like Webmention or functionality like Micropub as well. (It looks like they’re doing a lot of building on SquareSpace, so by proxy it would be great if they were supporting these open standards.) I love that it seems to have been created by a group of science journalists to help out the cause.

As I watch some of the Domain of One’s Own community in higher education, it feels to me that it’s primarily full of humanities related professors and researchers and doesn’t seem to be doing enough outreach to their science, engineering, math, or other colleagues who desperately need these tools as well as help with basic communication.

Indieweb and Education Tweetstorm

Chris Aldrich:

I’ve posted an article about Indieweb and Education on the wiki at https://indieweb.org/Indieweb_for_Education

I’ve posted an article about Academic Samizdat on the wiki at https://indieweb.org/academic_samizdat

I’ve also posted an article about commonplace books on the wiki at https://indieweb.org/commonplace_book

I’m writing a multi-part series for academics on & Education based on these links.

Perhaps @profhacker might be interested in running such a series of articles?

I’m contemplating a proposal to @osbridge on and Education based on @t‘s recommendation ‏http://opensourcebridge.org/call-for-proposals/

May have to come up with something related for @mattervc based on @benwerd‘s tweet https://twitter.com/benwerd/status/847115083318607872

In fashion, I’ve archived this tweetstorm using NoterLive.com on my own site: http://boffosocko.com/2017/03/29/indieweb-and-education-tweetstorm/

Some Thoughts on Academic Publishing and “Who’s downloading pirated papers? Everyone” from Science | AAAS

Bookmarked Who's downloading pirated papers? Everyone by John Bohannon (Science | AAAS)
An exclusive look at data from the controversial web site Sci-Hub reveals that the whole world, both poor and rich, is reading pirated research papers.

Sci Hub has been in the news quite a bit over the past half a year and the bookmarked article here gives some interesting statistics. I’ll preface some of the following editorial critique with the fact that I love John Bohannon’s work; I’m glad he’s spent the time to do the research he has. Most of the rest of the critique is aimed at the publishing industry itself.

From a journalistic standpoint, I find it disingenuous that the article didn’t actually hyperlink to Sci Hub. Neither did it link out (or provide a full quote) to Alicia Wise’s Twitter post(s) nor link to her rebuttal list of 20 ways to access their content freely or inexpensively. Of course both of these are editorial related, and perhaps the rebuttal was so flimsy as to be unworthy of a link from such an esteemed publication anyway.

Sadly, Elsevier’s list of 20 ways of free/inexpensive access doesn’t really provide any simple coverage for graduate students or researchers in poorer countries which are the likeliest group of people using Sci Hub, unless they’re going to fraudulently claim they’re part of a class which they’re not, and is this morally any better than the original theft method? It’s almost assuredly never used by patients, which seem to be covered under one of the options, as the option to do so is painfully undiscoverable past their typical $30/paper firewalls. Their patchwork hodgepodge of free access is so difficult to not only discern, but one must keep in mind that this is just one of dozens of publishers a researcher must navigate to find the one thing they’re looking for right now (not to mention the thousands of times they need to do this throughout a year, much less a career).

Consider this experiment, which could be a good follow up to the article: is it easier to find and download a paper by title/author/DOI via Sci Hub (a minute) versus through any of the other publishers’ platforms with a university subscription (several minutes) or without a subscription (an hour or more to days)? Just consider the time it would take to dig up every one of 30 references in an average journal article: maybe just a half an hour via Sci Hub versus the days and/or weeks it would take to jump through the multiple hoops to first discover, read about, and then gain access and then download them from the over 14 providers (and this presumes the others provide some type of “access” like Elsevier).

Those who lived through the Napster revolution in music will realize that the dead simplicity of their system is primarily what helped kill the music business compared to the ecosystem that exists now with easy access through the multiple streaming sites (Spotify, Pandora, etc.) or inexpensive paid options like (iTunes). If the publishing business doesn’t want to get completely killed, they’re going to need to create the iTunes of academia. I suspect they’ll have internal bean-counters watching the percentage of the total (now apparently 5%) and will probably only do something before it passes a much larger threshold, though I imagine that they’re really hoping that the number stays stable which signals that they’re not really concerned. They’re far more likely to continue to maintain their status quo practices.

Some of this ease-of-access argument is truly borne out by the statistics of open access papers which are downloaded by Sci Hub–it’s simply easier to both find and download them that way compared to traditional methods; there’s one simple pathway for both discovery and download. Surely the publishers, without colluding, could come up with a standardized method or protocol for finding and accessing their material cheaply and easily?

“Hart-Davidson obtained more than 100 years of biology papers the hard way—legally with the help of the publishers. ‘It took an entire year just to get permission,’ says Thomas Padilla, the MSU librarian who did the negotiating.” John Bohannon in Who’s downloading pirated papers? Everyone

Personally, I use use relatively advanced tools like LibX, which happens to be offered by my institution and which I feel isn’t very well known, and it still takes me longer to find and download a paper than it would via Sci Hub. God forbid if some enterprising hacker were to create a LibX community version for Sci Hub. Come to think of it, why haven’t any of the dozens of publishers built and supported simple tools like LibX which make their content easy to access? If we consider the analogy of academic papers to the introduction of machine guns in World War I, why should modern researchers still be using single-load rifles against an enemy that has access to nuclear weaponry?

My last thought here comes on the heels of the two tweets from Alicia Wise mentioned, but not shown in the article:

She mentions that the New York Times charges more than Elsevier does for a full subscription. This is tremendously disingenuous as Elsevier is but one of dozens of publishers for which one would have to subscribe to have access to the full panoply of material researchers are typically looking for. Further, Elsevier nor their competitors are making their material as easy to find and access as the New York Times does. Neither do they discount access to the point that they attempt to find the subscription point that their users find financially acceptable. Case in point: while I often read the New York Times, I rarely go over their monthly limit of articles to need any type of paid subscription. Solely because they made me an interesting offer to subscribe for 8 weeks for 99 cents, I took them up on it and renewed that deal for another subsequent 8 weeks. Not finding it worth the full $35/month price point I attempted to cancel. I had to cancel the subscription via phone, but why? The NYT customer rep made me no less than 5 different offers at ever decreasing price points–including the 99 cents for 8 weeks which I had been getting!!–to try to keep my subscription. Elsevier, nor any of their competitors has ever tried (much less so hard) to earn my business. (I’ll further posit that it’s because it’s easier to fleece at the institutional level with bulk negotiation, a model not too dissimilar to the textbook business pressuring professors on textbook adoption rather than trying to sell directly the end consumer–the student, which I’ve written about before.)

(Trigger alert: Apophasis to come) And none of this is to mention the quality control that is (or isn’t) put into the journals or papers themselves. Fortunately one need’t even go further than Bohannon’s other writings like Who’s Afraid of Peer Review? Then there are the hordes of articles on poor research design and misuse of statistical analysis and inability to repeat experiments. Not to give them any ideas, but lately it seems like Elsevier buying the Enquirer and charging $30 per article might not be a bad business decision. Maybe they just don’t want to play second-banana to TMZ?

Interestingly there’s a survey at the end of the article which indicates some additional sources of academic copyright infringement. I do have to wonder how the data for the survey will be used? There’s always the possibility that logged in users will be indicating they’re circumventing copyright and opening themselves up to litigation.

I also found the concept of using the massive data store as a means of applied corpus linguistics for science an entertaining proposition. This type of research could mean great things for science communication in general. I have heard of people attempting to do such meta-analysis to guide the purchase of potential intellectual property for patent trolling as well.

Finally, for those who haven’t done it (ever or recently), I’ll recommend that it’s certainly well worth their time and energy to attend one or more of the many 30-60 minute sessions most academic libraries offer at the beginning of their academic terms to train library users on research tools and methods. You’ll save yourself a huge amount of time.

Thoughts on “Some academics remain skeptical of Academia.edu” | University Affairs

Replied to Some academics remain skeptical of Academia.edu (University Affairs)
They warn scholars to €œthink twice€ before sharing their work on the popular social network.
This morning I ran across a tweet from colleague Andrew Eckford:

His response was probably innocuous enough, but I thought the article should be put to task a bit more.

“35 million academics, independent scholars and graduate students as users, who collectively have uploaded some eight million texts”

35 million users is an okay number, but their engagement must be spectacularly bad if only 8 million texts are available. How many researchers do you know who’ve published only a quarter of an article anywhere, much less gotten tenure?

“the platform essentially bans access for academics who, for whatever reason, don’t have an Academia.edu account. It also shuts out non-academics.”

They must have changed this, as pretty much anyone with an email address (including non-academics) can create a free account and use the system. I’m fairly certain that the platform was always open to the public from the start, but the article doesn’t seem to question the statement at all. If we want to argue about shutting out non-academics or even academics in poorer countries, let’s instead take a look at “big publishing” and their $30+/paper paywalls and publishing models, shall we?

“I don’t trust academia.edu”

Given his following discussion, I can only imagine what he thinks of big publishers in academia and that debate.

“McGill’s Dr. Sterne calls it “the gamification of research,”

Most research is too expensive to really gamify in such a simple manner. Many researchers are publishing to either get or keep their jobs and don’t have much time, information, or knowledge to try to game their reach in these ways. And if anything, the institutionalization of “publish or perish” has already accomplished far more “gamification”, Academia.edu is just helping to increase the reach of the publication. Given that research shows that most published research isn’t even read, much less cited, how bad can Academia.edu really be? [Cross reference: Reframing What Academic Freedom Means in the Digital Age]

If we look at Twitter and the blogging world as an analogy with Academia.edu and researchers, Twitter had a huge ramp up starting in 2008 and helped bloggers obtain eyeballs/readers, but where is it now? Twitter, even with a reasonable business plan is stagnant with growing grumblings that it may be failing. I suspect that without significant changes that Academia.edu (which is a much smaller niche audience than Twitter) will also eventually fall by the wayside.

The article rails against not knowing what the business model is or what’s happening with the data. I suspect that the platform itself doesn’t have a very solid business plan and they don’t know what to do with the data themselves except tout the numbers. I’d suspect they’re trying to build “critical mass” so that they can cash out by selling to one of the big publishers like Elsevier, who might actually be able to use such data. But this presupposes that they’re generating enough data; my guess is that they’re not. And on that subject, from a journalistic viewpoint, where’s the comparison to the rest of the competition including ResearchGate.net or Mendeley.com, which in fact was purchased by Elsevier? As it stands, this simply looks like a “hit piece” on Academia.edu, and sadly not a very well researched or reasoned one.

In sum, the article sounds to me like a bunch of Luddites running around yelling “fire”, particularly when I’d imagine that most referred to in the piece feed into the more corporate side of publishing in major journals rather than publishing it themselves on their own websites. I’d further suspect they’re probably not even practicing academic samizdat. It feels to me like the author and some of those quoted aren’t actively participating in the social media space to be able to comment on it intelligently. If the paper wants to pick at the academy in this manner, why don’t they write an exposé on the fact that most academics still have websites that look like they’re from 1995 (if, in fact, they have anything beyond their University’s mandated business card placeholder) when there are a wealth of free and simple tools they could use? Let’s at least build a cart before we start whipping the horse.

For academics who really want to spend some time and thought on a potential solution to all of this, I’ll suggest that they start out by owning their own domain and own their own data and work. The movement certainly has an interesting philosophy that’s a great start in fixing the problem; it can be found at http://www.indiewebcamp.com.

3 Rules of Academic Blogging

Bookmarked 3 Rules of Academic Blogging (The Chronicle of Higher Education)
Not only is the form alive and well, but one of its most vibrant subsections is in academe.

1. Pick the right platform.
2. Write whatever you want.
3. Write for the sake of writing.

The Mathematics Literature Project

Bookmarked The Mathematics Literature Project (tqft.net)

“The Mathematics Literature Project intends to survey the state of the freely accessible mathematics literature. In particular, it will index freely accessible URLs for mathematics articles. These are legitimately hosted copies of the article (i.e. at publishers, the arXiv, institutional repositories, or authors’ homepages), which are freely available in any browser, anywhere in the world.”