


In this area, I prefer using Zotero for collecting, ResearchRabbit for expanding scope, Hypothes.is for note taking/annotations which I then pipe into Obsidian for revising, cross linking, and further writing/revisions. Depending on the project, some of it may be more analog with index cards similar to Victor Margolin’s process.
To show the general benefits, I’m copying and pasting from my own prior notes and writing:
ZK is an excellent tool for literature reviews! It is a relative neologism (with a slightly shifted meaning in English over the past decade with respect to its prior historical use in German) for a specific form of note taking or commonplacing that has generally existed in academia for centuries. Excellent descriptions of it can be found littered around, though not under a specific easily searchable key word or phrase, though perhaps phrases like “historical method” or “wissenschaftlichen arbeitens” may come closest.
Some of the more interesting examples of it being spelled out in academe include:
- Thomas, Keith. “Diary: Working Methods.” London Review of Books, June 10, 2010. https://www.lrb.co.uk/the-paper/v32/n11/keith-thomas/diary.
- Webb, Sidney. Methods of Social Study. London; New York: Longmans, Green & Co., 1932. http://archive.org/details/b31357891.
- Eco, Umberto. How to Write a Thesis. Translated by Caterina Mongiat Farina and Geoff Farina. 1977. Reprint, Cambridge, MA, USA: MIT Press, 2015. https://mitpress.mit.edu/books/how-write-thesis.
- Sertillanges, Antonin Gilbert, and Mary Ryan. The Intellectual Life: Its Spirit, Conditions, Methods. First English Edition, Fifth printing. 1921. Reprint, Westminster, MD: The Newman Press, 1960. http://archive.org/details/a.d.sertillangestheintellectuallife. (Particularly ch 7 if I recall correctly)
- Allosso, Dan, and S. F. Allosso. How to Make Notes and Write. Minnesota State Pressbooks, 2022. https://minnstate.pressbooks.pub/write/. (The first half of the book on notes is most useful in this context; see also https://boffosocko.com/2022/08/02/how-to-make-notes-and-write-a-handbook-by-dan-allosso-and-s-f-allosso/)
Ahrens, Sönke. How to Take Smart Notes: One Simple Technique to Boost Writing, Learning and Thinking – for Students, Academics and Nonfiction Book Writers. Create Space, 2017.For academic use, anecdotally I’ve seen very strong recent use of the general methods most compellingly demonstrated in Obsidian (they’ve also got a Discord server with an academic-focused channel) though many have profitably used DevonThink and Tinderbox (which has a strong, well-established community of academics around it) as much more established products with dovetails into a variety of other academic tools. Obviously there are several dozens of newer tools for doing this since about 2018, though for a lifetime’s work, one might worry about their longevity as products.
I study many of these methods from the viewpoint of intellectual history (and not just for my own use), so I’m happy to discuss them and their variations ad nauseam.
It's gonna be a while before AI takes all our jobs though. Or maybe not, since it speaks with the confidence of a mediocre white man while gaslighting me throughout this whole reply.
Mark Bernstein of Eastgate Systems, Inc., is the designer of Tinderbox: https://www.eastgate.com/Tinderbox/
Join Mark as he turns back the clock to examine some early Tools For Thought, and the people who created them. There’s quite a lot to learn from both, as well as a research literature that repays study.
The infinite canvas as a thinking space now has a long history, but few of the early systems are well known. I think some of them might be worth a brief look, in terms of the ideas they brought forward and in terms of the tasks they sought to address. For example:
Sketchpad: Ivan Sutherland’s system from the 1960 kicked off interactive computer graphics AND object-oriented programming.
NLS/Augment: Doug Engelbart’s original outliner, the first system that explicitly sought to be a tool for thought.
Xanadu: Ted Nelson’s early proposal for a hypertext docuverse.
Storyspace: the first system intended for non-sequential narrative. Introduced in 1987 and still in use today.
Intermedia: a platform for digital pedagogy, developed at Brown and BBN.
KMS: a hypertext system for technical documentation, the source of Akscyn’s Law
Microcosm: A hypertext system based chiefly on contextual links, the ancestor of all sculptural hypertext.
Aquanet: the 1990 system from Halasz, Trigg, and Marshall at Xerox PARC, described as a tool to hold your knowledge in place.
VIKI: the first spatial hypertext system, designed by Cathy Marshall as a reaction to Aquanet and the start of an enormously influential line of research
I suspect that some version of this option I’ve done before will work, though I haven’t tried updating it recently: https://boffosocko.com/2018/07/02/threaded-conversations-between-wordpress-and-twitter/
Our friend @jimgroom@social.ds106.us has recently written up some details that get around the t.co shortener problems: https://bavatuesdays.com/archiving-twitter/
I’ve also heard that @darius@friend.camp is working on something for a public release soon: https://friend.camp/@darius/109521972924049369. He may still be looking for beta testers if you’re interested.
I’ve got lots of friends in a supportive online community who can help: https://indieweb.org
Keep in mind that the output of these feeds will be instance specific, and the tag feed will only get mentions from your instance and instances yours can “see” (or gets by follows with federation). So if you use a different instance, you may see more or less in your feeds. Because of its size and depth of federation, this makes mastodon.social a good bet for these sorts of subscriptions, but your experience may vary depending on your needs.